<farkuhar>
r0ni: your findings match what SiFuh reported about ca-certificates (only when doing sysup not building it alone). In these situations pkgadd -u needs to go through TWO footprints (both the old version and the new version) to generate the keep list and the conflicting files list. That might be a major contributor to the delay you noticed.
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<r0ni>
farkuhar: that would make sense. I've since changed my pkgmk.conf so i'll check with the updates above if it happens still when running them later